We invite you to join us for a series of online introductory workshops designed by the Navari Family Center for Digital Scholarship and the Genomics and Bioinformatics Core Facility to help Life Sciences graduate students hit the ground running this fall semester! 

This series of workshops is designed to help participants starting out with minimal knowledge of command line tools work up to performing tasks such as creating simple R scripts for data analysis. This series will also introduce attendees to computing resources available to them at Notre Dame. While this program is designed for incoming Life Sciences graduate students, it is open to anyone who would like to learn more about bioinformatics.

• To register for every session, email your name and netid to jvecchio@nd.edu.

• To register for individual sessions, visit libcal.library.nd.edu/calendar/bioinformatics-introductory-program.

 

Monday, July 27

9:00am - 9:30am: Bioinformatics Introduction at Notre Dame

9:30am - 10:15am: Using Center for Research Computing (CRC) Resources

10:20am - 11:10am: The Unix Shell Part 1 of 2

11:15am - 12:15pm: The Unix Shell Part 2 of 2

1:15pm - 2:45pm: Project Organization and Management for Genomics

3:15pm - 4:20pm: Databases and SQL Part 1 of 5

4:30pm - 5:00pm: Databases and SQL Part 2 of 5

 

Tuesday, July 28

9:45am - 10:50am: Data Wrangling and Processing for Genomics Part 1 of 3

11am - 11:55am: Data Wrangling and processing for Genomics Part 2 of 3

12:00pm - 1:00pm: Bring Your Own Lunch Session—Bioinformatics Datasets & Other Library Resources

1:15pm - 3:00pm: Data Wrangling and Processing for Genomics Part 3 of 3

3:15pm - 3:55pm: Databases and SQL Part 3 of 5

4:00pm - 4:55pm: Databases and SQL Part 4 of 5

 

Wednesday, July 29

9:30am - 10:15am: Introduction to R and RStudio for Genomics Part 1 of 5

10:30am - 11:50am: Introduction to R and RStudio for Genomics Part 2 of 5

12:00pm - 1:00pm: Bring Your Own Lunch Session—Introduction to ORCID and OSF

1:15pm - 2:45pm: Introduction to R and RStudio for Genomics Part 3 of 5

3:15 - 4:00pm: Databases and SQL Part 5 of 5

 

Thursday, July 30

9:30am  - 10:30am: Introduction to R and RStudio for Genomics Part 4 of 5

10:45am - 12:00pm: Introduction to R and RStudio for Genomics Part 5 of 5

1:15pm - 2:00pm: Version Control with Git Part 1 of 3

2:15pm - 3:00pm: Version Control with Git Part 2 of 3

3:15pm - 4:15pm: Version Control with Git Part 3 of 3

4:15pm - 4:30pm: Concluding Remarks from Michael Pfrender

 

Series website: ndlib-cds.github.io/BIP-Week